When FedEx imports your products for you, you may owe import duties and other taxes on that delivery depending on where you live. Unlike the post office, FedEx does not force you to pay those fees before they'll give you your package. Instead, they pay them for you, and then bill you later. That bill is for those fees, so yes, you do need to pay FedEx for them, just as you'd pay the post office or their delivery agent for import duties or other taxes on delivery if you had your order shipped via the postal service.
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